- Predicted Gene MLOC_58813
MLOC_58813 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 21.3434 | 16.0123 | 17.2537 | 18.7765 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 19.6842 | 15.6693 | 12.9161 | 14.3625 |
| INF1 | Young developing inflorescences (5mm) | 41.6182 | 45.7437 | 53.4952 | 42.8166 |
| INF2 | Developing inflorescences (1-1.5 cm) | 39.6904 | 45.9963 | 38.8638 | 50.8868 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 16.8439 | 12.5743 | 13.8618 | 17.6498 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.35856 | 10.9412 | 20.3073 | 45.216 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 14.4934 | 14.1305 | 13.2353 | 15.1847 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.66838 | 2.45443 | 2.92506 | 6.77559 |
CDS Structure of MLOC_58813
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58813.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g43420.1 |
-1 |
6e-134 |
392 |
231/311 (74%) |
13103.m04667 protein single-stranded DNA-binding protein, putative, expressed |
| TAIR PP10 |
AT1G47720.1 |
-1 |
2e-22 |
96 |
64/205 (31%) |
| Symbols: OSB1 | Primosome PriB/single-strand DNA-binding | chr1:17561514-17562859 REVERSE LENGTH=261 |