- Predicted Gene MLOC_58812
MLOC_58812 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 64.4207 | 47.0909 | 49.7608 | 56.2955 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 13.8419 | 10.2403 | 11.8151 | 10.445 |
| INF1 | Young developing inflorescences (5mm) | 0.827448 | 1.25746 | 0.78477 | 0.937865 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.506128 | 0.242504 | 0.446899 | 0.477145 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 66.174 | 49.3092 | 51.7391 | 67.6303 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 196.245 | 116.746 | 104.972 | 345.994 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.85307 | 0.964238 | 0.361602 | 1.15932 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.277133 | 0.15776 | 0.479415 | 0.742926 |
CDS Structure of MLOC_58812
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58812.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g43410.1 |
+3 |
1e-66 |
215 |
141/227 (62%) |
13103.m04666 protein OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed |
| TAIR PP10 |
AT1G04240.1 |
+3 |
9e-40 |
142 |
96/206 (47%) |
| Symbols: SHY2, IAA3 | AUX/IAA transcriptional regulator family protein | chr1:1128564-1129319 REVERSE LENGTH=189 |