MLOC_5881 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.8675810.047910.32477.73111
LEAShoots from the seedlings (10 cm shoot stage)11.057410.85158.588697.62684
INF1Young developing inflorescences (5mm)8.887817.6563510.92866.32203
INF2Developing inflorescences (1-1.5 cm)8.9880612.700112.2910.7506
ROORoots from the seedlings (10 cm shoot stage)5.730138.330910.41188.38982
NODDeveloping tillers at six leaf stage, 3rd internode10.6910.537111.507929.8117
CAR5Developing grain, bracts removed (5 DPA)5.461956.304218.837925.59528
CAR15Developing grain, bracts removed (15 DPA)6.626645.879024.9915111.7937



CDS Structure of MLOC_5881






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_5881.8
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_5881.8CUST_17765_PI427708080AvailableAvailablecontig_136830 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g08624.1 +1 5e-52 175 84/96 (88%) 13103.m00998 protein dihydroflavonol-4-reductase, putative, expressed
TAIR PP10 AT4G33360.2 +1 9e-38 135 64/96 (67%) | Symbols: FLDH | NAD(P)-binding Rossmann-fold superfamily protein | chr4:16068123-16069374 REVERSE LENGTH=305