- Predicted Gene MLOC_58764
MLOC_58764 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.11973 | 4.29882 | 4.18398 | 4.34089 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.3053 | 13.6529 | 11.0837 | 9.29612 |
| INF1 | Young developing inflorescences (5mm) | 0.718391 | 0.650379 | 0.862606 | 0.700251 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.169872 | 0.198832 | 0.219805 | 0.239741 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.59084 | 0.979726 | 1.32852 | 1.18202 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.7301 | 0.906611 | 0.62424 | 1.89333 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.68288 | 1.68742 | 1.49953 | 1.75898 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.59516 | 1.58361 | 1.19661 | 3.98696 |
CDS Structure of MLOC_58764
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58764.5
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g46970.1 |
-1 |
0.0 |
910 |
475/541 (88%) |
13102.m05282 protein AMP-binding domain containing protein, expressed |
| TAIR PP10 |
AT1G65060.1 |
-1 |
0.0 |
679 |
362/539 (67%) |
| Symbols: 4CL3 | 4-coumarate:CoA ligase 3 | chr1:24167385-24171457 REVERSE LENGTH=561 |
