MLOC_58763 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains45.431838.989441.505647.433
LEAShoots from the seedlings (10 cm shoot stage)36.244131.051632.231730.3083
INF1Young developing inflorescences (5mm)17.705917.536618.268116.8054
INF2Developing inflorescences (1-1.5 cm)21.948522.324122.714627.526
ROORoots from the seedlings (10 cm shoot stage)61.722861.710549.128682.4919
NODDeveloping tillers at six leaf stage, 3rd internode51.697262.976751.9852211.528
CAR5Developing grain, bracts removed (5 DPA)38.066140.757740.503144.957
CAR15Developing grain, bracts removed (15 DPA)13.25914.282612.210135.027



CDS Structure of MLOC_58763






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58763.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251767.1NoneNoneNoneNone
MLOC_58763.1CUST_4013_PI427708080AvailableAvailablecontig_42971 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g46962.3 +3 0.0 655 343/392 (88%) 13102.m05280 protein VHS and GAT domain containing protein, expressed
TAIR PP10 AT5G16880.2 +3 2e-176 507 277/408 (68%) Target of Myb protein 1 | chr5:5549658-5551274 FORWARD LENGTH=407