- Predicted Gene MLOC_58758
MLOC_58758 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58758_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_58758_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.0464802 | 0.743084 | 0.284774 | 0.493782 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 131.35 | 103.486 | 113.735 | 98.5823 |
INF1 | Young developing inflorescences (5mm) | 0 | 0.0386557 | 0 | 0.0406817 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0975115 | 0.0624983 | 0.124542 | 0.107615 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.333357 | 0.190913 | 3.26346 | 0.665765 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.18453 | 0.335586 | 1.30804 | 1.64062 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.836325 | 0.521471 | 0.247616 | 0.553435 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0369257 | 0.162664 | 0.0538703 | 0.221223 |
CDS Structure of MLOC_58758
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58758.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g52240.1 |
-3 |
2e-170 |
482 |
239/268 (89%) |
13101.m05463 protein chlorophyll A-B binding protein, putative, expressed |
TAIR PP10 |
AT2G34420.1 |
-3 |
5e-160 |
455 |
230/267 (86%) |
| Symbols: LHB1B2, LHCB1.5 | photosystem II light harvesting complex gene B1B2 | chr2:14522716-14523513 REVERSE LENGTH=265 |