- Predicted Gene MLOC_58726
MLOC_58726 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58726_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_58726_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 22.517 | 24.1927 | 22.0104 | 26.0942 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0408125 | 0.0238422 | 0.0239403 | 0.0262879 |
INF1 | Young developing inflorescences (5mm) | 0.144036 | 0.132657 | 0.210336 | 0.157902 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.110524 | 0 | 0 | 0.138714 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.87849 | 11.1893 | 3.99389 | 12.9598 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.112996 | 0.0980832 | 0.0371869 | 0.245059 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.255386 | 0.535723 | 0.522093 | 0.528601 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0195882 | 0.0226484 | 0.0142055 | 0.0568069 |
CDS Structure of MLOC_58726
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58726.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g52860.1 |
+2 |
0.0 |
1193 |
599/867 (69%) |
13103.m05766 protein lipoxygenase, putative, expressed |
TAIR PP10 |
AT3G22400.1 |
+2 |
0.0 |
893 |
453/866 (52%) |
| Symbols: LOX5 | PLAT/LH2 domain-containing lipoxygenase family protein | chr3:7927011-7931167 FORWARD LENGTH=886 |