- Predicted Gene MLOC_58709
MLOC_58709 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58709_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_58709_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 4.98878 | 9.83697 | 9.7382 | 8.43159 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 10.9928 | 8.99946 | 7.01159 | 7.91983 |
INF1 | Young developing inflorescences (5mm) | 11.1686 | 11.6913 | 15.0679 | 9.96188 |
INF2 | Developing inflorescences (1-1.5 cm) | 18.3366 | 15.2118 | 18.3828 | 17.9246 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.46322 | 14.7996 | 11.4226 | 16.9036 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.62889 | 3.69616 | 4.52444 | 13.7444 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.94273 | 3.24531 | 3.67644 | 3.34074 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.88453 | 5.64246 | 7.70718 | 14.1316 |
CDS Structure of MLOC_58709
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58709.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g31900.1 |
-2 |
0.0 |
1205 |
722/967 (75%) |
13104.m03048 protein calmodulin-binding transcription activator 4, putative, expressed |
TAIR PP10 |
AT1G67310.1 |
-2 |
5e-174 |
541 |
412/1004 (41%) |
Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains | chr1:25198182-25203126 REVERSE LENGTH=1016 |