- Predicted Gene MLOC_58708
MLOC_58708 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 16.4979 | 14.4341 | 12.878 | 15.7911 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.28016 | 6.35621 | 9.12055 | 6.8334 |
| INF1 | Young developing inflorescences (5mm) | 20.2879 | 25.1401 | 26.6696 | 21.955 |
| INF2 | Developing inflorescences (1-1.5 cm) | 18.9086 | 22.9267 | 26.6061 | 26.5752 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 10.121 | 14.6757 | 16.8891 | 18.2333 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.31327 | 8.05093 | 11.1658 | 26.8758 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 11.1971 | 12.6782 | 12.4363 | 13.1196 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.72928 | 4.99082 | 4.39324 | 11.6444 |
CDS Structure of MLOC_58708
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58708.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g31910.1 |
+1 |
7e-26 |
105 |
66/81 (81%) |
13104.m03049 protein expressed protein |
| TAIR PP10 |
AT5G63480.1 |
+1 |
3e-12 |
66 |
33/52 (63%) |
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:25417317-25418473 FORWARD LENGTH=189 |