MLOC_58693 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7003230.4452250.9715240.577605
LEAShoots from the seedlings (10 cm shoot stage)1.349950.1502330.2790160.444174
INF1Young developing inflorescences (5mm)0.6900180.855530.7400330.653032
INF2Developing inflorescences (1-1.5 cm)0.2524670.6129650.5282860.475822
ROORoots from the seedlings (10 cm shoot stage)0.5101750.4495350.6726290.430167
NODDeveloping tillers at six leaf stage, 3rd internode0.4334860.5441780.09381880.975495
CAR5Developing grain, bracts removed (5 DPA)3.040794.234073.272813.36891
CAR15Developing grain, bracts removed (15 DPA)0.081464600.08012380.155982



CDS Structure of MLOC_58693






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58693.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374071NoneNoneNoneNone
MLOC_58693.2CUST_3999_PI427708080AvailableAvailablecontig_42895 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g61330.1 -1 6e-170 495 298/358 (83%) 13101.m06526 protein ankyrin homolog precursor, putative, expressed
TAIR PP10 AT2G03430.1 -1 6e-12 66 50/129 (39%) Ankyrin repeat family protein | chr2:1036192-1037536 REVERSE LENGTH=240