MLOC_58681 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.08324.724755.798636.4279
LEAShoots from the seedlings (10 cm shoot stage)3.455270.764933.039321.30531
INF1Young developing inflorescences (5mm)10.94710.8097.715655.43019
INF2Developing inflorescences (1-1.5 cm)03.633251.512120
ROORoots from the seedlings (10 cm shoot stage)7.443767.503317.768717.62574
NODDeveloping tillers at six leaf stage, 3rd internode0.038994400.08443340
CAR5Developing grain, bracts removed (5 DPA)6.522139.409577.380765.89363
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_58681






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58681.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_58681.1CUST_13877_PI427708080AvailableAvailablecontig_42881 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g42210.1 -2 0.0 540 287/396 (72%) 13102.m04665 protein membrane-associated salt-inducible protein like, putative, expressed
TAIR PP10 AT4G36680.1 -2 2e-70 238 138/360 (38%) Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:17292479-17293717 REVERSE LENGTH=412