MLOC_58649 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.406254.1614211.266.75927
LEAShoots from the seedlings (10 cm shoot stage)00.1966310.1950620.368374
INF1Young developing inflorescences (5mm)0.2825510.10177300.19106
INF2Developing inflorescences (1-1.5 cm)0.2825840.3437920.1193460.357799
ROORoots from the seedlings (10 cm shoot stage)0.4667780.4782731.624730.839775
NODDeveloping tillers at six leaf stage, 3rd internode0.16037400.1140730.111712
CAR5Developing grain, bracts removed (5 DPA)0.3328190.6102410.1132770.434544
CAR15Developing grain, bracts removed (15 DPA)1717.872067.741716.524891.83



CDS Structure of MLOC_58649






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58649.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252572.1NoneNoneNoneNone
MLOC_58649.1CUST_3995_PI427708080AvailableAvailablecontig_428581 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g36240.1 +2 3e-18 77 39/69 (57%) 13112.m03715 protein inhibitor I family protein, putative
TAIR PP10None-----