MLOC_58644 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.550415.406517.29816.5333
LEAShoots from the seedlings (10 cm shoot stage)11.35372.963443.485635.09856
INF1Young developing inflorescences (5mm)62.059278.2868.233863.2519
INF2Developing inflorescences (1-1.5 cm)55.477549.198545.715457.4635
ROORoots from the seedlings (10 cm shoot stage)25.441123.225625.262528.4729
NODDeveloping tillers at six leaf stage, 3rd internode20.090920.278710.655557.7379
CAR5Developing grain, bracts removed (5 DPA)7.978075.77586.876766.81963
CAR15Developing grain, bracts removed (15 DPA)1.757330.994091.948523.69355



CDS Structure of MLOC_58644






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58644.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359910NoneNoneNoneNone
MLOC_58644.1CUST_3993_PI427708080AvailableAvailablecontig_42852 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g41860.1 -1 0.0 1456 743/849 (88%) 13112.m04378 protein START domain containing protein, expressed
TAIR PP10 AT2G34710.1 -1 0.0 1155 605/843 (72%) | Symbols: PHB, ATHB14, ATHB-14, PHB-1D | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | chr2:14639548-14643993 REVERSE LENGTH=852