MLOC_58614 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4613530.6054740.7755770.55181
LEAShoots from the seedlings (10 cm shoot stage)0.4691131.035341.766440.942569
INF1Young developing inflorescences (5mm)00.020874700.0253709
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)8.427657.298526.251998.37741
NODDeveloping tillers at six leaf stage, 3rd internode0.2221330.4221040.9241691.62335
CAR5Developing grain, bracts removed (5 DPA)0.3029350.1801290.1644990.194818
CAR15Developing grain, bracts removed (15 DPA)0.1389890.117280.1693650.375529



CDS Structure of MLOC_58614






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58614.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368931NoneNoneNoneNone
MLOC_58614.2CUST_3986_PI427708080AvailableAvailablecontig_42822 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g41100.1 +1 5e-88 285 208/446 (47%) 13106.m04287 protein transcription factor, putative, expressed
TAIR PP10 AT5G06839.3 +1 8e-90 289 201/464 (43%) | Symbols: TGA10, bZIP65 | bZIP transcription factor family protein | chr5:2120911-2126217 FORWARD LENGTH=460