- Predicted Gene MLOC_58595
MLOC_58595 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 9.84043 | 10.2264 | 10.1954 | 9.5693 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.05122 | 7.9028 | 7.08031 | 5.2184 |
| INF1 | Young developing inflorescences (5mm) | 11.6207 | 13.6895 | 13.5401 | 10.3457 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.54334 | 7.80107 | 8.44365 | 7.99663 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 8.04019 | 9.90707 | 9.88221 | 10.7062 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.20393 | 4.47316 | 8.72684 | 15.8148 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 8.98266 | 10.3477 | 11.7577 | 9.74215 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.9947 | 1.85328 | 1.50085 | 4.22588 |
CDS Structure of MLOC_58595
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58595.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g43480.1 |
+1 |
4e-142 |
412 |
228/283 (81%) |
13102.m04829 protein expressed protein |
| TAIR PP10 |
AT5G51170.1 |
+1 |
9e-84 |
262 |
131/232 (56%) |
unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0406 (InterPro:IPR019146); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:20793906-20795330 REVERSE LENGTH=285 |