MLOC_58593 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.264903000
LEAShoots from the seedlings (10 cm shoot stage)24.880322.601522.23370
INF1Young developing inflorescences (5mm)0.4895420.1876720.199020
INF2Developing inflorescences (1-1.5 cm)0.189212000
ROORoots from the seedlings (10 cm shoot stage)000.5504150
NODDeveloping tillers at six leaf stage, 3rd internode23.52697.7566737.37560
CAR5Developing grain, bracts removed (5 DPA)000.2004750
CAR15Developing grain, bracts removed (15 DPA)0.132687000



CDS Structure of MLOC_58593






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK360713
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360713CUST_20258_PI427708080NoneNoneNone
MLOC_15699.1NoneAvailableNonecontig_1571363 (Mapped)
MLOC_3651.1NoneAvailableNonecontig_132374 (Mapped)
MLOC_47741.2NoneAvailableAvailablecontig_311402 (Mapped)
MLOC_58593.1NoneAvailableNonecontig_428075 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----