- Predicted Gene MLOC_58592
MLOC_58592 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.27884 | 6.5425 | 6.28907 | 5.49762 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.7019 | 9.35019 | 8.98015 | 7.92879 |
| INF1 | Young developing inflorescences (5mm) | 10.5207 | 12.1926 | 12.2396 | 8.87526 |
| INF2 | Developing inflorescences (1-1.5 cm) | 10.184 | 12.4164 | 11.7249 | 11.4635 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.35881 | 10.8849 | 9.8226 | 11.5301 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.39994 | 7.05582 | 7.13952 | 21.0823 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.9435 | 10.25 | 10.5447 | 9.32619 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.86178 | 2.55335 | 3.69704 | 5.98431 |
CDS Structure of MLOC_58592
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58592.8
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g43906.1 |
+1 |
0.0 |
585 |
297/381 (78%) |
13102.m04882 protein ceramide kinase-related, putative, expressed |
| TAIR PP10 |
AT5G51290.1 |
+1 |
3e-176 |
526 |
292/598 (49%) |
Diacylglycerol kinase family protein | chr5:20844252-20848157 REVERSE LENGTH=608 |
