- Predicted Gene MLOC_58589
MLOC_58589 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.16682 | 13.522 | 11.3692 | 11.2764 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 9.03284 | 4.77244 | 4.67625 | 5.5374 |
| INF1 | Young developing inflorescences (5mm) | 14.0865 | 10.9968 | 12.3852 | 10.3036 |
| INF2 | Developing inflorescences (1-1.5 cm) | 13.7974 | 15.1669 | 12.4654 | 15.3842 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.63867 | 8.22405 | 5.75078 | 9.09617 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.78689 | 1.78717 | 1.55846 | 6.18622 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 19.7279 | 18.6595 | 19.7097 | 18.8179 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.15637 | 7.12921 | 5.82241 | 16.2145 |
CDS Structure of MLOC_58589
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58589.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g03230.2 |
-2 |
0.0 |
1283 |
706/863 (82%) |
13107.m00263 protein eukaryotic translation initiation factor 3 subunit C, putative, expressed |
| TAIR PP10 |
AT3G56150.2 |
-2 |
0.0 |
959 |
529/837 (63%) |
| Symbols: EIF3C | eukaryotic translation initiation factor 3C | chr3:20833790-20836820 REVERSE LENGTH=900 |