MLOC_5857 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.29497 | 4.34564 | 5.32239 | 5.48696 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.25316 | 3.40038 | 4.91533 | 4.65898 |
| INF1 | Young developing inflorescences (5mm) | 1.5713 | 1.18736 | 1.67167 | 1.23842 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.82131 | 1.79678 | 2.15837 | 1.98429 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 19.7545 | 13.7327 | 16.9489 | 19.8147 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 35.3782 | 39.3383 | 35.1982 | 132.556 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.67426 | 3.09009 | 2.38533 | 2.6847 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 13.5678 | 14.5989 | 15.9427 | 32.8935 |
CDS Structure of MLOC_5857
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5857.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g05600.1 |
+3 |
0.0 |
591 |
290/343 (85%) |
13112.m00564 protein hydrolase, alpha/beta fold family protein, putative, expressed |
| TAIR PP10 |
AT3G48410.1 |
+3 |
5e-126 |
374 |
182/325 (56%) |
alpha/beta-Hydrolases superfamily protein | chr3:17925786-17928100 REVERSE LENGTH=385 |
