- Predicted Gene MLOC_58569
MLOC_58569 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 23.9272 | 17.324 | 16.0244 | 18.2029 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.9003 | 11.5093 | 16.369 | 9.57918 |
| INF1 | Young developing inflorescences (5mm) | 11.9372 | 14.5564 | 18.6045 | 12.3378 |
| INF2 | Developing inflorescences (1-1.5 cm) | 26.5571 | 17.0816 | 21.3087 | 23.4661 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 49.8491 | 21.585 | 26.2856 | 27.3731 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 11.5211 | 14.3742 | 20.5096 | 41.4425 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 12.4508 | 14.0626 | 13.714 | 13.1032 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.10434 | 5.78693 | 5.10999 | 13.9503 |
CDS Structure of MLOC_58569
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58569.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g24990.2 |
+3 |
2e-175 |
506 |
242/268 (90%) |
13109.m02385 protein CAF1 family ribonuclease containing protein, putative, expressed |
| TAIR PP10 |
AT2G32070.1 |
+3 |
7e-135 |
401 |
183/261 (70%) |
Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr2:13640829-13641656 REVERSE LENGTH=275 |