MLOC_5856 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.13255 | 3.03894 | 2.88765 | 2.30123 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.70126 | 1.88305 | 2.01729 | 1.6792 |
| INF1 | Young developing inflorescences (5mm) | 3.6253 | 3.8795 | 4.06176 | 2.68556 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.31633 | 4.11701 | 3.81757 | 3.81768 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.939209 | 2.09141 | 2.01258 | 1.84566 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.66988 | 1.19081 | 1.47256 | 3.48788 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.84954 | 3.7281 | 3.87357 | 3.01153 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.57983 | 1.82607 | 1.44918 | 3.19328 |
CDS Structure of MLOC_5856
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5856.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g05640.1 |
+2 |
0.0 |
971 |
502/673 (75%) |
13112.m00568 protein pentatricopeptide containing protein, putative, expressed |
| TAIR PP10 |
AT1G22960.1 |
+2 |
8e-119 |
396 |
238/642 (37%) |
Pentatricopeptide repeat (PPR) superfamily protein | chr1:8128086-8130242 REVERSE LENGTH=718 |