MLOC_5855 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.22408 | 4.90965 | 3.97081 | 4.74313 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.01309 | 3.62677 | 3.35772 | 2.74095 |
| INF1 | Young developing inflorescences (5mm) | 27.2434 | 29.3751 | 27.4187 | 24.4132 |
| INF2 | Developing inflorescences (1-1.5 cm) | 21.7355 | 20.7022 | 19.8183 | 24.141 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.85314 | 7.26003 | 6.62285 | 9.0061 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.313105 | 0.360256 | 1.05981 | 1.84955 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.31399 | 5.52941 | 5.63006 | 6.02337 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.835211 | 0.935086 | 1.26769 | 2.27469 |
CDS Structure of MLOC_5855
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5855.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g67510.1 |
-3 |
0.0 |
607 |
334/388 (86%) |
13101.m07337 protein recA protein, putative, expressed |
| TAIR PP10 |
AT2G19490.1 |
-3 |
5e-161 |
472 |
265/381 (70%) |
recA DNA recombination family protein | chr2:8441732-8444006 FORWARD LENGTH=430 |
