- Predicted Gene MLOC_58533
MLOC_58533 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.899423 | 0.382306 | 0.702915 | 0.533252 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.985835 | 0.884613 | 1.79131 | 0.883797 |
INF1 | Young developing inflorescences (5mm) | 0.87339 | 1.34615 | 1.34645 | 0.806841 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.582921 | 0.989162 | 0.62001 | 0.716432 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.39276 | 0.696313 | 0.658355 | 0.619882 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.8052 | 2.74548 | 3.42215 | 7.71808 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.22542 | 1.80022 | 2.37602 | 1.4206 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.548619 | 0.16566 | 0.752002 | 0.913217 |
CDS Structure of MLOC_58533
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58533.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g39310.1 |
+3 |
1e-27 |
119 |
93/305 (30%) |
13111.m03880 protein NB-ARC domain containing protein, expressed |
TAIR PP10 | None | - | - | - | - | - |