MLOC_58533 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8994230.3823060.7029150.533252
LEAShoots from the seedlings (10 cm shoot stage)0.9858350.8846131.791310.883797
INF1Young developing inflorescences (5mm)0.873391.346151.346450.806841
INF2Developing inflorescences (1-1.5 cm)0.5829210.9891620.620010.716432
ROORoots from the seedlings (10 cm shoot stage)0.392760.6963130.6583550.619882
NODDeveloping tillers at six leaf stage, 3rd internode2.80522.745483.422157.71808
CAR5Developing grain, bracts removed (5 DPA)1.225421.800222.376021.4206
CAR15Developing grain, bracts removed (15 DPA)0.5486190.165660.7520020.913217



CDS Structure of MLOC_58533






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58533.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_58533.1NoneAvailableAvailablecontig_42761 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g39310.1 +3 1e-27 119 93/305 (30%) 13111.m03880 protein NB-ARC domain containing protein, expressed
TAIR PP10None-----