MLOC_58529 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.797925.124686.587955.98981
LEAShoots from the seedlings (10 cm shoot stage)11.36039.3383611.73229.72062
INF1Young developing inflorescences (5mm)7.142977.584227.863146.4795
INF2Developing inflorescences (1-1.5 cm)10.425411.694312.825712.7853
ROORoots from the seedlings (10 cm shoot stage)6.717088.739558.9588911.0187
NODDeveloping tillers at six leaf stage, 3rd internode7.9183310.264312.013736.3308
CAR5Developing grain, bracts removed (5 DPA)9.362919.7091510.96099.99818
CAR15Developing grain, bracts removed (15 DPA)5.566255.538296.0601713.2887



CDS Structure of MLOC_58529






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58529.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252480.1NoneNoneNoneNone
MLOC_58529.3CUST_3967_PI427708080AvailableAvailablecontig_42758 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g13614.3 +1 6e-172 501 319/403 (79%) 13103.m01581 protein transcription factor, putative, expressed
TAIR PP10 AT2G35530.1 +1 1e-61 213 150/358 (42%) | Symbols: bZIP16, AtbZIP16 | basic region/leucine zipper transcription factor 16 | chr2:14923280-14926025 REVERSE LENGTH=409