- Predicted Gene MLOC_58525
MLOC_58525 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58525_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_58525_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 9.96285 | 20.8239 | 17.548 | 17.8548 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 14.2653 | 9.8471 | 9.91853 | 10.0954 |
INF1 | Young developing inflorescences (5mm) | 56.5782 | 55.8023 | 50.7812 | 46.6784 |
INF2 | Developing inflorescences (1-1.5 cm) | 59.1651 | 51.005 | 50.4443 | 59.8625 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.99227 | 16.3359 | 12.5452 | 18.6685 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.86463 | 1.13661 | 4.98966 | 6.35906 |
CAR5 | Developing grain, bracts removed (5 DPA) | 30.2244 | 28.7907 | 32.2093 | 30.4681 |
CAR15 | Developing grain, bracts removed (15 DPA) | 10.2941 | 8.65716 | 8.29664 | 21.4604 |
CDS Structure of MLOC_58525
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58525.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g02810.1 |
-1 |
0.0 |
1281 |
702/869 (81%) |
13109.m00202 protein CCAAT/enhancer-binding protein, putative, expressed |
TAIR PP10 |
AT1G72440.1 |
-1 |
0.0 |
834 |
464/871 (53%) |
| Symbols: EDA25, SWA2 | CCAAT-binding factor | chr1:27268325-27273596 REVERSE LENGTH=1043 |