MLOC_58522 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.799869.888129.2054511.082
LEAShoots from the seedlings (10 cm shoot stage)3.828890.5453640.7157831.51422
INF1Young developing inflorescences (5mm)20.386719.259815.077417.9967
INF2Developing inflorescences (1-1.5 cm)15.475321.271715.406923.4325
ROORoots from the seedlings (10 cm shoot stage)1.293223.647272.967295.13192
NODDeveloping tillers at six leaf stage, 3rd internode0.02869010.03736850.01492820.129207
CAR5Developing grain, bracts removed (5 DPA)5.993175.802366.345087.16322
CAR15Developing grain, bracts removed (15 DPA)0.2725440.0815130.3551620.574035



CDS Structure of MLOC_58522






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58522.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360333NoneNoneNoneNone
MLOC_58522.2CUST_3966_PI427708080AvailableAvailablecontig_42749 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g42070.1 +2 0.0 1093 605/789 (77%) 13101.m04320 protein kinesin motor domain containing protein, putative, expressed
TAIR PP10 AT1G18550.1 +2 0.0 735 432/778 (56%) ATP binding microtubule motor family protein | chr1:6381656-6384340 REVERSE LENGTH=725