- Predicted Gene MLOC_58514
MLOC_58514 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58514_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_58514_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.876451 | 1.92518 | 1.78951 | 1.50638 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.84088 | 0.930069 | 0.830519 | 1.02652 |
INF1 | Young developing inflorescences (5mm) | 7.15833 | 7.22756 | 6.814 | 5.52443 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.53552 | 5.63416 | 5.09733 | 5.61409 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.578188 | 1.5199 | 0.861421 | 1.50756 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.87608 | 2.64027 | 2.32168 | 8.29124 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.51302 | 1.46742 | 1.51648 | 1.34972 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.554971 | 0.445921 | 0.457521 | 1.03375 |
CDS Structure of MLOC_58514
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58514.8
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g56940.1 |
-1 |
0.0 |
1020 |
566/857 (66%) |
13101.m06041 protein flap endonuclease, putative, expressed |
TAIR PP10 |
AT1G29630.2 |
-1 |
7e-176 |
539 |
323/706 (46%) |
5-3 exonuclease family protein | chr1:10349587-10353538 FORWARD LENGTH=735 |