MLOC_58514 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8764511.925181.789511.50638
LEAShoots from the seedlings (10 cm shoot stage)1.840880.9300690.8305191.02652
INF1Young developing inflorescences (5mm)7.158337.227566.8145.52443
INF2Developing inflorescences (1-1.5 cm)5.535525.634165.097335.61409
ROORoots from the seedlings (10 cm shoot stage)0.5781881.51990.8614211.50756
NODDeveloping tillers at six leaf stage, 3rd internode1.876082.640272.321688.29124
CAR5Developing grain, bracts removed (5 DPA)1.513021.467421.516481.34972
CAR15Developing grain, bracts removed (15 DPA)0.5549710.4459210.4575211.03375



CDS Structure of MLOC_58514






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58514.8
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK357641NoneNoneNoneNone
MLOC_58514.8CUST_3962_PI427708080AvailableAvailablecontig_42737 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g56940.1 -1 0.0 1020 566/857 (66%) 13101.m06041 protein flap endonuclease, putative, expressed
TAIR PP10 AT1G29630.2 -1 7e-176 539 323/706 (46%) 5-3 exonuclease family protein | chr1:10349587-10353538 FORWARD LENGTH=735