MLOC_58513 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.660116.772315.567916.6142
LEAShoots from the seedlings (10 cm shoot stage)12.34611.418512.70519.94908
INF1Young developing inflorescences (5mm)21.073822.922725.60918.5398
INF2Developing inflorescences (1-1.5 cm)18.610119.744222.58421.3228
ROORoots from the seedlings (10 cm shoot stage)19.363921.300819.07423.5312
NODDeveloping tillers at six leaf stage, 3rd internode25.26225.334935.66284.9758
CAR5Developing grain, bracts removed (5 DPA)17.743217.161316.837716.4668
CAR15Developing grain, bracts removed (15 DPA)9.9161710.84149.3344222.88



CDS Structure of MLOC_58513






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58513.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248288.1NoneNoneNoneNone
MLOC_58513.2CUST_3961_PI427708080AvailableAvailablecontig_42736 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g11110.1 -3 0.0 602 337/456 (74%) 13110.m01005 protein expressed protein
TAIR PP10 AT3G28670.1 -3 1e-101 320 189/443 (43%) oxidoreductase, zinc-binding dehydrogenase family protein | chr3:10744183-10746983 FORWARD LENGTH=491