MLOC_58512 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7209310.5475740.4029350.630487
LEAShoots from the seedlings (10 cm shoot stage)0.324830.2914330.6851220.407379
INF1Young developing inflorescences (5mm)0.036188700.06989650.0584109
INF2Developing inflorescences (1-1.5 cm)00.05514170.09560790.103583
ROORoots from the seedlings (10 cm shoot stage)2.303351.883241.7212.55152
NODDeveloping tillers at six leaf stage, 3rd internode1.002850.859012.085153.5834
CAR5Developing grain, bracts removed (5 DPA)0.1138490.04318310.02245850.0632253
CAR15Developing grain, bracts removed (15 DPA)0.034380.09914080.07461310.202136



CDS Structure of MLOC_58512






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58512.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376265NoneNoneNoneNone
MLOC_58512.2CUST_3960_PI427708080AvailableAvailablecontig_42736 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g58250.1 +3 1e-143 425 221/338 (65%) 13104.m06113 protein protein kinase, putative, expressed
TAIR PP10 AT3G09010.1 +3 8e-115 351 183/309 (59%) Protein kinase superfamily protein | chr3:2750285-2752086 FORWARD LENGTH=393