- Predicted Gene MLOC_58511
MLOC_58511 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58511_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_58511_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 18.4983 | 18.9378 | 18.2672 | 19.1072 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 17.2179 | 3.9121 | 5.67451 | 7.49583 |
INF1 | Young developing inflorescences (5mm) | 26.4716 | 28.6885 | 26.6755 | 23.8993 |
INF2 | Developing inflorescences (1-1.5 cm) | 30.8097 | 34.8934 | 30.4274 | 36.6399 |
ROO | Roots from the seedlings (10 cm shoot stage) | 19.3613 | 19.8326 | 16.441 | 22.2643 |
NOD | Developing tillers at six leaf stage, 3rd internode | 24.5889 | 36.107 | 42.0971 | 108.778 |
CAR5 | Developing grain, bracts removed (5 DPA) | 31.4464 | 31.6834 | 31.0511 | 31.2845 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.88169 | 5.6483 | 6.91826 | 15.9032 |
CDS Structure of MLOC_58511
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58511.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g58470.1 |
+1 |
0.0 |
1142 |
574/678 (85%) |
13104.m06141 protein choline transporter-related, putative, expressed |
TAIR PP10 |
AT3G15380.1 |
+1 |
0.0 |
947 |
469/678 (69%) |
Plasma-membrane choline transporter family protein | chr3:5193319-5196435 FORWARD LENGTH=700 |