MLOC_58510 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains20.998617.431218.941717.663
LEAShoots from the seedlings (10 cm shoot stage)9.892175.075164.938265.50225
INF1Young developing inflorescences (5mm)5.279534.044884.175453.62239
INF2Developing inflorescences (1-1.5 cm)2.898563.660874.794633.78237
ROORoots from the seedlings (10 cm shoot stage)14.938713.743715.644515.7981
NODDeveloping tillers at six leaf stage, 3rd internode5.22716.605037.5717119.4299
CAR5Developing grain, bracts removed (5 DPA)9.646588.245198.442098.08175
CAR15Developing grain, bracts removed (15 DPA)0.7598690.3346890.7613781.35124



CDS Structure of MLOC_58510






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58510.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361637NoneNoneNoneNone
MLOC_58510.2CUST_3958_PI427708080AvailableAvailablecontig_42732 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g59160.1 -2 8e-140 442 225/346 (65%) 13104.m06235 protein peroxidase precursor, putative, expressed
TAIR PP10 AT1G71695.1 -2 4e-58 209 134/339 (40%) Peroxidase superfamily protein | chr1:26964359-26966557 FORWARD LENGTH=358