MLOC_58487 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains47.650562.873851.556260.4012
LEAShoots from the seedlings (10 cm shoot stage)22.771823.20718.060618.5057
INF1Young developing inflorescences (5mm)11.2779.5354810.2199.16842
INF2Developing inflorescences (1-1.5 cm)6.670327.204756.74547.94647
ROORoots from the seedlings (10 cm shoot stage)35.944154.67548.151365.4506
NODDeveloping tillers at six leaf stage, 3rd internode3.697123.8125.5317313.589
CAR5Developing grain, bracts removed (5 DPA)25.347325.918825.01526.3675
CAR15Developing grain, bracts removed (15 DPA)66.289563.30354.5208155.267



CDS Structure of MLOC_58487






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58487.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363981NoneNoneNoneNone
MLOC_58487.1CUST_3954_PI427708080AvailableAvailablecontig_42708 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g37700.1 -3 0.0 1043 523/608 (86%) 13105.m03930 protein periplasmic beta-glucosidase precursor, putative, expressed
TAIR PP10 AT3G47000.1 -3 0.0 817 395/596 (66%) Glycosyl hydrolase family protein | chr3:17313811-17316539 REVERSE LENGTH=608