- Predicted Gene MLOC_58471
MLOC_58471 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58471_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_58471_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 25.1804 | 20.8246 | 22.705 | 21.7862 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 18.4756 | 8.09347 | 13.058 | 9.981 |
INF1 | Young developing inflorescences (5mm) | 4.90655 | 3.37011 | 3.55195 | 3.48107 |
INF2 | Developing inflorescences (1-1.5 cm) | 13.8343 | 12.4629 | 16.0868 | 15.4065 |
ROO | Roots from the seedlings (10 cm shoot stage) | 18.092 | 16.7809 | 18.694 | 17.1618 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.98663 | 2.58403 | 3.27771 | 6.22532 |
CAR5 | Developing grain, bracts removed (5 DPA) | 84.0711 | 87.6547 | 79.7698 | 82.6966 |
CAR15 | Developing grain, bracts removed (15 DPA) | 24.0406 | 24.9835 | 24.5465 | 61.9808 |
CDS Structure of MLOC_58471
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58471.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g08090.1 |
+3 |
0.0 |
769 |
397/477 (83%) |
13112.m00853 protein amino acid transporter, putative, expressed |
TAIR PP10 |
AT1G77380.1 |
+3 |
0.0 |
644 |
327/461 (71%) |
| Symbols: AAP3, ATAAP3 | amino acid permease 3 | chr1:29075201-29077252 REVERSE LENGTH=476 |