MLOC_58470 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains23.902917.10221.659318.2728
LEAShoots from the seedlings (10 cm shoot stage)15.552912.022913.937910.4737
INF1Young developing inflorescences (5mm)15.965516.426214.995312.2705
INF2Developing inflorescences (1-1.5 cm)14.169812.402216.648513.971
ROORoots from the seedlings (10 cm shoot stage)21.026818.000825.531620.6523
NODDeveloping tillers at six leaf stage, 3rd internode21.031712.645320.233334.3737
CAR5Developing grain, bracts removed (5 DPA)14.608116.719816.643214.5382
CAR15Developing grain, bracts removed (15 DPA)9.021186.810517.5273217.644



CDS Structure of MLOC_58470






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58470.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK359861NoneNoneNoneNone
MLOC_58470.2CUST_3950_PI427708080AvailableAvailablecontig_42693 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g52280.1 -1 4e-17 76 35/46 (76%) 13103.m05693 protein expressed protein
TAIR PP10None-----