- Predicted Gene MLOC_58461
MLOC_58461 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58461_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_58461_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 30.0961 | 23.4762 | 27.5966 | 29.5195 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.96435 | 10.8257 | 14.5199 | 10.8517 |
INF1 | Young developing inflorescences (5mm) | 14.6058 | 17.2924 | 18.5674 | 16.2365 |
INF2 | Developing inflorescences (1-1.5 cm) | 9.62397 | 11.6437 | 10.232 | 13.394 |
ROO | Roots from the seedlings (10 cm shoot stage) | 28.9136 | 25.5325 | 35.7536 | 37.2148 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.22801 | 4.09586 | 5.05618 | 13.8831 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.73734 | 6.07376 | 5.54931 | 6.6649 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.20353 | 1.00563 | 1.52629 | 3.27359 |
CDS Structure of MLOC_58461
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58461.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g46000.1 |
+3 |
1e-122 |
358 |
170/200 (85%) |
13105.m04896 protein ras-related protein, putative, expressed |
TAIR PP10 |
AT4G09720.1 |
+3 |
2e-102 |
306 |
145/200 (73%) |
| Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A | chr4:6133101-6134959 FORWARD LENGTH=206 |