- Predicted Gene MLOC_58456
MLOC_58456 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0 | 1.00289 | 0.338917 | 0.885111 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.229426 | 2.57738 | 1.10128 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0.0000360419 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.190811 | 0.0906285 | 0 | 0.189935 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.36818 | 0 | 0.658554 | 0.253975 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0.0367104 | 0.0686289 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.4928 | 4.7995 | 3.88847 | 5.06354 |
CAR15 | Developing grain, bracts removed (15 DPA) | 741.013 | 959.54 | 718.043 | 2074.55 |
CDS Structure of MLOC_58456
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58456.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g58590.1 |
+2 |
1e-11 |
59 |
29/62 (47%) |
13101.m06221 protein expressed protein |
TAIR PP10 | None | - | - | - | - | - |