- Predicted Gene MLOC_58455
MLOC_58455 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.09099 | 2.12985 | 2.07047 | 1.96367 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.118855 | 0.38083 | 0.47119 | 0.25852 |
| INF1 | Young developing inflorescences (5mm) | 0.0783269 | 0.319687 | 0.260712 | 0.211407 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.184713 | 0.294514 | 0.26321 | 0.292439 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 8.36199 | 5.21101 | 4.34045 | 5.59394 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.765147 | 2.2141 | 0.694765 | 4.85538 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.568962 | 0.97788 | 0.692745 | 0.770766 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.153392 | 0.161472 | 0.121339 | 0.385063 |
CDS Structure of MLOC_58455
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58455.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g16230.1 |
-2 |
6e-118 |
362 |
236/386 (61%) |
13101.m01810 protein TKL_IRAK_CR4L.2 - The CR4L subfamily has homology with Crinkly4 |
| TAIR PP10 |
AT1G28390.1 |
-2 |
6e-56 |
199 |
132/315 (42%) |
Protein kinase superfamily protein | chr1:9966814-9968226 REVERSE LENGTH=470 |
