- Predicted Gene MLOC_58449
MLOC_58449 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58449_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_58449_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.46701 | 0.961642 | 0.744163 | 0.916791 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0440464 | 0.33488 | 0.0586991 | 0.11132 |
INF1 | Young developing inflorescences (5mm) | 0.0212911 | 0.0260749 | 0.0775418 | 0.044068 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0.0524188 | 0.0704316 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.79844 | 4.72032 | 3.05823 | 4.04186 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.734293 | 0.427098 | 0.448659 | 0.882683 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.457533 | 0.528733 | 0.299142 | 0.41863 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0350169 | 0.0643729 | 0.0742217 | 0.179014 |
CDS Structure of MLOC_58449
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58449.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g72810.1 |
-3 |
0.0 |
573 |
316/444 (71%) |
13101.m07936 protein secreted glycoprotein, putative, expressed |
TAIR PP10 |
AT1G16905.1 |
-3 |
1e-28 |
119 |
82/250 (33%) |
Curculin-like (mannose-binding) lectin family protein | chr1:5782546-5783817 REVERSE LENGTH=423 |