MLOC_58445 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.9007614.035213.731615.7039
LEAShoots from the seedlings (10 cm shoot stage)14.41357.523257.844769.19821
INF1Young developing inflorescences (5mm)6.180874.232433.294094.38806
INF2Developing inflorescences (1-1.5 cm)4.924125.521346.441547.21175
ROORoots from the seedlings (10 cm shoot stage)10.794213.849112.100819.7795
NODDeveloping tillers at six leaf stage, 3rd internode16.668218.210118.805765.7739
CAR5Developing grain, bracts removed (5 DPA)17.233216.877114.50319.2447
CAR15Developing grain, bracts removed (15 DPA)1.086231.411590.9572913.26342



CDS Structure of MLOC_58445






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58445.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372385NoneNoneNoneNone
MLOC_58445.2CUST_3944_PI427708080AvailableAvailablecontig_42679 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g15410.1 -1 0.0 832 559/886 (63%) 13103.m01804 protein expressed protein
TAIR PP10 AT5G16720.1 -1 5e-63 229 196/559 (35%) Protein of unknown function, DUF593 | chr5:5494309-5496562 FORWARD LENGTH=675