- Predicted Gene MLOC_58431
MLOC_58431 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.66896 | 6.5709 | 6.48856 | 5.44851 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 7.39557 | 4.89467 | 5.3099 | 5.01578 |
| INF1 | Young developing inflorescences (5mm) | 15.0423 | 15.3343 | 14.0938 | 11.5969 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.5476 | 15.839 | 13.5371 | 15.4173 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.38734 | 6.77743 | 5.01325 | 7.05943 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.17245 | 5.32236 | 5.85666 | 17.8652 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.9208 | 8.34325 | 9.88782 | 8.46075 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.66907 | 5.00554 | 5.11267 | 11.0748 |
CDS Structure of MLOC_58431
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58431.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g45160.1 |
+3 |
0.0 |
1717 |
974/1396 (70%) |
13107.m04758 protein SAC3/GANP family protein, expressed |
| TAIR PP10 |
AT3G06290.1 |
+3 |
0.0 |
816 |
538/1338 (40%) |
SAC3/GANP/Nin1/mts3/eIF-3 p25 family | chr3:1899123-1907297 REVERSE LENGTH=1697 |