MLOC_58430 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.449741.959732.900282.14073
LEAShoots from the seedlings (10 cm shoot stage)4.408574.627355.965113.96849
INF1Young developing inflorescences (5mm)4.909036.443647.102724.49209
INF2Developing inflorescences (1-1.5 cm)7.67455.870046.123336.47407
ROORoots from the seedlings (10 cm shoot stage)2.700723.81533.234953.92733
NODDeveloping tillers at six leaf stage, 3rd internode2.923813.745835.6672711.919
CAR5Developing grain, bracts removed (5 DPA)4.272374.603364.572593.83224
CAR15Developing grain, bracts removed (15 DPA)2.877482.136522.957365.35994



CDS Structure of MLOC_58430






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58430.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364119NoneNoneNoneNone
MLOC_58430.3CUST_3940_PI427708080AvailableAvailablecontig_42658 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g09020.1 -3 0.0 725 361/488 (74%) 13101.m00956 protein WD domain, G-beta repeat domain containing protein, expressed
TAIR PP10None-----