MLOC_58422 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains26.006826.584429.422928.0328
LEAShoots from the seedlings (10 cm shoot stage)26.671772.647318.913931.6695
INF1Young developing inflorescences (5mm)3.30391.721121.85922.04446
INF2Developing inflorescences (1-1.5 cm)2.533913.992845.156024.4682
ROORoots from the seedlings (10 cm shoot stage)25.050819.185517.426421.643
NODDeveloping tillers at six leaf stage, 3rd internode20.899624.586532.343464.9436
CAR5Developing grain, bracts removed (5 DPA)8.7884410.986712.90811.395
CAR15Developing grain, bracts removed (15 DPA)1.82571.9591.221344.54011



CDS Structure of MLOC_58422






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58422.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354338NoneNoneNoneNone
MLOC_58422.2CUST_18172_PI427708080AvailableAvailablecontig_42596 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g01590.1 -1 0.0 771 370/574 (64%) 13102.m00080 protein glycosyl hydrolases, putative, expressed
TAIR PP10 AT1G62660.1 -1 0.0 578 290/566 (51%) Glycosyl hydrolases family 32 protein | chr1:23199949-23203515 FORWARD LENGTH=648