- Predicted Gene MLOC_58422
MLOC_58422 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_58422_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 26.0068 | 26.5844 | 29.4229 | 28.0328 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 26.6717 | 72.6473 | 18.9139 | 31.6695 |
INF1 | Young developing inflorescences (5mm) | 3.3039 | 1.72112 | 1.8592 | 2.04446 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.53391 | 3.99284 | 5.15602 | 4.4682 |
ROO | Roots from the seedlings (10 cm shoot stage) | 25.0508 | 19.1855 | 17.4264 | 21.643 |
NOD | Developing tillers at six leaf stage, 3rd internode | 20.8996 | 24.5865 | 32.3434 | 64.9436 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.78844 | 10.9867 | 12.908 | 11.395 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.8257 | 1.959 | 1.22134 | 4.54011 |
CDS Structure of MLOC_58422
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58422.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g01590.1 |
-1 |
0.0 |
771 |
370/574 (64%) |
13102.m00080 protein glycosyl hydrolases, putative, expressed |
TAIR PP10 |
AT1G62660.1 |
-1 |
0.0 |
578 |
290/566 (51%) |
Glycosyl hydrolases family 32 protein | chr1:23199949-23203515 FORWARD LENGTH=648 |