MLOC_58404 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.08613870.14345800.197483
LEAShoots from the seedlings (10 cm shoot stage)0.0783390.087480.08587250.0865682
INF1Young developing inflorescences (5mm)0.07849310.06836910.02544360.0609009
INF2Developing inflorescences (1-1.5 cm)0.1117460.040680500.113345
ROORoots from the seedlings (10 cm shoot stage)0.1105450.13816700.298794
NODDeveloping tillers at six leaf stage, 3rd internode000.0153990.0445457
CAR5Developing grain, bracts removed (5 DPA)0.3092521.251671.105961.27131
CAR15Developing grain, bracts removed (15 DPA)828.685976.27750.5272657.68



CDS Structure of MLOC_58404






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58404.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375298NoneNoneNoneNone
MLOC_58404.1CUST_316_PI427708083AvailableAvailablecontig_42638 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g37270.1 +2 1e-19 92 74/270 (27%) 13111.m03648 protein AMBP1 - Antimicrobial peptide MBP-1 family protein precursor, expressed
TAIR PP10None-----