- Predicted Gene MLOC_58390
MLOC_58390 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.9118 | 14.3495 | 12.1407 | 13.2823 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 15.6038 | 13.7055 | 13.0171 | 12.135 |
| INF1 | Young developing inflorescences (5mm) | 27.893 | 28.1113 | 26.295 | 23.8613 |
| INF2 | Developing inflorescences (1-1.5 cm) | 22.0803 | 24.3669 | 24.8743 | 26.6565 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 13.713 | 16.8313 | 16.1601 | 19.8593 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 9.75175 | 14.0993 | 18.1326 | 48.163 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 17.8148 | 17.2027 | 18.4604 | 17.7382 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.51019 | 5.93979 | 6.28665 | 14.9455 |
CDS Structure of MLOC_58390
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58390.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g56565.1 |
+2 |
0.0 |
1071 |
569/743 (77%) |
13102.m06501 protein endoribonuclease, putative, expressed |
| TAIR PP10 |
AT3G04480.1 |
+2 |
0.0 |
722 |
400/736 (54%) |
endoribonucleases | chr3:1193988-1197320 REVERSE LENGTH=718 |