- Predicted Gene MLOC_58387
MLOC_58387 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 29.9726 | 25.2421 | 23.2391 | 23.5249 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 16.9448 | 19.0518 | 15.5159 | 12.7442 |
| INF1 | Young developing inflorescences (5mm) | 15.8018 | 17.471 | 19.3042 | 13.9829 |
| INF2 | Developing inflorescences (1-1.5 cm) | 17.4502 | 20.8384 | 27.3796 | 21.1371 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 32.8644 | 29.4036 | 37.0445 | 30.8382 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 37.5806 | 40.6314 | 27.7785 | 98.5457 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 36.4543 | 37.2384 | 38.8274 | 33.2941 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 9.00285 | 8.17705 | 8.74172 | 20.3301 |
CDS Structure of MLOC_58387
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_58387.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g01640.1 |
-2 |
4e-80 |
252 |
141/164 (86%) |
13101.m00088 protein Rer1 protein, putative, expressed |
| TAIR PP10 |
AT2G21600.1 |
-2 |
7e-69 |
222 |
125/157 (80%) |
| Symbols: ATRER1B, RER1B | endoplasmatic reticulum retrieval protein 1B | chr2:9243550-9244579 FORWARD LENGTH=195 |