MLOC_5838 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.0377056 | 0 | 0.0469177 | 0.0571675 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0553287 | 0.180307 | 0.527586 | 0.226468 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0.0633348 | 0 | 0.0586848 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.714823 | 0.437795 | 0.203998 | 0.542781 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.110458 | 0.0932451 | 0.153558 | 0.351196 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.05978 | 0.780057 | 1.07529 | 0.932367 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.61601 | 2.10737 | 2.0958 | 4.38584 |
CDS Structure of MLOC_5838
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5838.7
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g55940.2 |
-2 |
4e-144 |
426 |
247/356 (69%) |
13104.m05811 protein sodium/calcium exchanger protein, putative, expressed |
| TAIR PP10 |
AT3G13320.1 |
-2 |
3e-148 |
437 |
251/360 (70%) |
| Symbols: CAX2, atcax2 | cation exchanger 2 | chr3:4315418-4317997 FORWARD LENGTH=441 |
