MLOC_5837 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.301491 | 0.370707 | 0.303631 | 0.37073 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.137358 | 0.0926988 | 0.494858 | 0.242305 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0.0580727 | 0.0701059 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.0878 | 3.81127 | 1.97807 | 4.66802 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.0285507 | 0 | 0.0753963 |
CDS Structure of MLOC_5837
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5837.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g04640.1 |
+3 |
2e-131 |
398 |
244/467 (52%) |
13102.m00487 protein Myb-like DNA-binding domain containing protein, putative, expressed |
| TAIR PP10 |
AT3G13040.2 |
+3 |
1e-72 |
243 |
152/310 (49%) |
myb-like HTH transcriptional regulator family protein | chr3:4172415-4174456 REVERSE LENGTH=449 |
