MLOC_58359 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5125571.258960.9194321.36385
LEAShoots from the seedlings (10 cm shoot stage)1.128851.228991.542171.38003
INF1Young developing inflorescences (5mm)0.6040820.8096670.6008450.692358
INF2Developing inflorescences (1-1.5 cm)0.9429730.7664661.311461.25786
ROORoots from the seedlings (10 cm shoot stage)0.9292961.448691.098482.28032
NODDeveloping tillers at six leaf stage, 3rd internode1.499541.445061.551845.81284
CAR5Developing grain, bracts removed (5 DPA)1.851621.853321.356762.07592
CAR15Developing grain, bracts removed (15 DPA)2.459383.107322.277387.48022



CDS Structure of MLOC_58359






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58359.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364062NoneNoneNoneNone
MLOC_58359.1CUST_18171_PI427708080AvailableAvailablecontig_42596 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g34614.1 +3 3e-33 134 113/319 (35%) 13110.m03083 protein csAtPR5, putative, expressed
TAIR PP10None-----