MLOC_58353 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.606413.751614.490912.4048
LEAShoots from the seedlings (10 cm shoot stage)18.419313.87614.634313.0294
INF1Young developing inflorescences (5mm)14.034716.243816.944211.7258
INF2Developing inflorescences (1-1.5 cm)16.510719.136816.811317.0519
ROORoots from the seedlings (10 cm shoot stage)10.349713.723511.563714.4201
NODDeveloping tillers at six leaf stage, 3rd internode14.601220.834224.990570.8134
CAR5Developing grain, bracts removed (5 DPA)18.077319.257221.607716.4066
CAR15Developing grain, bracts removed (15 DPA)10.016210.932211.685220.204



CDS Structure of MLOC_58353






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58353.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_58353.1CUST_8025_PI427708083AvailableAvailablecontig_42586 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g10420.1 +2 7e-143 446 231/238 (97%) 13111.m01104 protein phosphatidylinositol kinase, putative, expressed
TAIR PP10 AT5G64070.1 +2 9e-138 429 218/238 (92%) | Symbols: PI-4KBETA1, PI4KBETA1 | phosphatidylinositol 4-OH kinase beta1 | chr5:25637492-25643902 REVERSE LENGTH=1121