MLOC_58342 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.268467.077837.040115.59554
LEAShoots from the seedlings (10 cm shoot stage)5.575433.224773.0843.26703
INF1Young developing inflorescences (5mm)12.78412.573112.25679.50082
INF2Developing inflorescences (1-1.5 cm)14.012814.573312.796913.7832
ROORoots from the seedlings (10 cm shoot stage)2.524155.319364.606275.26302
NODDeveloping tillers at six leaf stage, 3rd internode3.936115.291534.3744716.1001
CAR5Developing grain, bracts removed (5 DPA)7.615627.235877.452436.38444
CAR15Developing grain, bracts removed (15 DPA)2.370991.983012.348854.5118



CDS Structure of MLOC_58342






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_58342.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_58342.2CUST_13829_PI427708080AvailableAvailablecontig_42576 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g26200.1 +2 0.0 1145 535/610 (88%) 13103.m03075 protein methyltransferase, putative, expressed
TAIR PP10 AT1G26850.2 +2 0.0 920 425/606 (70%) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:9301146-9303432 REVERSE LENGTH=616